CAMI newsletter

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Only 4 weeks left until the CAMI session and kickstart of new COSI MICROBIOME on ISMB/ECCB 2017, Jul 23

Dear colleagues,

only 4 weeks are left until our special session at ISMB/ECCB 2017 (SST02). In this session, we will kick-start the new MICROBIOME COSI, which is supposed to establish a platform for developers and users of computational methods in microbiome research within the ISCB.

We invite you all to register to the ISMB/ECCB 2017 and to join our Session SST02.

Agenda for Special Session SST02 on Jul 23

Special session on CAMI and kickstart of new COSI MICROBIOME on ISMB/ECCB 2017, Jul 23

Dear colleagues,

the CAMI initiative is increasingly recognized by the scientific community. After the very successful and interesting CAMI + M3 meeting in May 2017 in College Park, Maryland, we will now connect CAMI with the International Society for Computational Biology (ISCB).

CAMI Evaluation Workshop

Evaluation Workshop of the first CAMI Challenge

The 3 day workshop will take place at the Isaac Newton Institute in Cambridge, UK in May 11-13, 2016. 
Workshop Venue: https://www.newton.ac.uk/

In addition to discussing the results of the current challenge, future plans for the initiative will be outlined.

The agenda of the workshop is available here.

Best,

The CAMI Team

 

CAMI Evaluation results online

Dear metagenome method developers,

we are happy to announce the first evaluation results of the CAMI challenge. Check out https://data.cami-challenge.org/analyse to browse the first evaluation results for assembly, binning and profiling.

We are currently working on combined visualizations for the binning and profiling evaluation metrics. We will also publish more metrics for the profiling tools soon, so check the web site frequently for updates in the coming weeks. 

CAMI metagenome binning and profiling challenge deadline extended to July 18 2015, 6:00am UTC

Dear metagenome method developers,

due to several requests by CAMI participants, we decided to 
extend the deadline for the CAMI metagenome binning and profiling
challenge to

July 18, 2015, 6:00am UTC.

If you need help in building a Docker container for your tool, feel free to contact us and we will provide technical support.

Thanks for your feedback!

CAMI metagenome binning and profiling challenge closing soon!

Dear metagenome method developers,

the second submission deadline of CAMI, namely for submitting binning and profiling results is approaching: 

July 3, 2015, 4:00am UTC

We would like to get some feedback from you whether you are participating in the binning/profiling challenge and if you will be able to submit on time.

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