Assembly benchmarking results

CAMI II

Dataset	Sample	# results
Plant-associated: Simulated Oxford Nanopore metagenome data	rhimgCAMI2_long_read_ont_pooled_assembly	1
Plant-associated: Simulated Pacific Bioscience metagenome data	rhimgCAMI2_long_read_pacbio_pooled_assembly	1
Plant-associated: Simulated Illumina HiSeq metagenome data	rhimgCAMI2_short_read_pooled_assembly	5
Marine: Simulated hybrid metagenome data	marmgCAMI2_hybrid_pooled_assembly	2
Marine: Simulated Illumina HiSeq metagenome data	marmgCAMI2_short_read_pooled_assembly	12
	marmgCAMI2_short_read_sample_0	2
	marmgCAMI2_short_read_sample_1	1
	marmgCAMI2_short_read_sample_2	1
	marmgCAMI2_short_read_sample_3	1
Marine: Simulated Pacific Bioscience metagenome data	marmgCAMI2_long_read_pooled_assembly	1
Marine: Simulated Pacific Bioscience metagenome data	marmgCAMI2_long_read_sample_0	1
Strain-madness: Simulated Illumina HiSeq metagenome data	strmgCAMI2_short_read_pooled_assembly	5
Strain-madness: Simulated Pacific Bioscience metagenome data	strmgCAMI2_long_read_pooled_assembly	1
Toy Mouse Gut: Simulated Illumina HiSeq metagenome data	mousegutCAMI2_short_read_pooled_assembly	1
	mousegutCAMI2_short_read_sample_0	2
	mousegutCAMI2_short_read_sample_1	2
	mousegutCAMI2_short_read_sample_2	2
	mousegutCAMI2_short_read_sample_3	2
	mousegutCAMI2_short_read_sample_4	2
	mousegutCAMI2_short_read_sample_5	2
	mousegutCAMI2_short_read_sample_6	2
	mousegutCAMI2_short_read_sample_7	2
	mousegutCAMI2_short_read_sample_8	2
	mousegutCAMI2_short_read_sample_9	2
Toy Human Microbiome Project: Oral - Simulated Illumina HiSeq	hmp_gastrooralCAMI2_short_read_pooled_assembly	1

CAMI I

Dataset	Sample	# results
High complexity: Simulated Illumina HiSeq	cami1_high_pooled_assembly	3
Medium complexity: Simulated Illumina HiSeq 270 bp inserts	cami1_medium_pooled_assembly	2
Low complexity: Simulated Illumina HiSeq	cami1_low_short_read	1